STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI26919.1Mannose-6-phosphate isomerase, cupin superfamily. (123 aa)    
Predicted Functional Partners:
SDI26895.1
Protein N-acetyltransferase, RimJ/RimL family.
 
  
  0.843
SDI26875.1
Protein of unknown function.
       0.773
SDI26825.1
2-Methylisocitrate lyase, PEP mutase family.
       0.680
SDI26849.1
AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase.
       0.676
SDI20905.1
Protein of unknown function.
  
     0.592
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.549
SDJ81336.1
Hypothetical protein.
  
     0.549
SDI14288.1
Cupin domain-containing protein.
    
  0.504
rfbF
Nucleotidyl transferase.
  
 
  0.502
SDJ93005.1
Capsular exopolysaccharide family.
 
 
 0.498
Your Current Organism:
Chryseobacterium jejuense
NCBI taxonomy Id: 445960
Other names: C. jejuense, Chryseobacterium jejuense Weon et al. 2008 emend. Montero-Calasanz et al. 2014, Chryseobacterium jejuense Weon et al. 2008 emend. Wu et al. 2013, Chryseobacterium sp. JS17-8, DSM 19299, KACC 12501, strain JS17-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.