STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI34637.1Protein of unknown function. (406 aa)    
Predicted Functional Partners:
SDI34608.1
Hypothetical protein.
 
     0.948
SDI34668.1
TonB-dependent Receptor Plug Domain.
 
     0.937
ccp_1
Cytochrome c peroxidase.
 
     0.825
SDJ40483.1
TonB-dependent Receptor Plug Domain.
 
     0.786
SDJ40540.1
Hypothetical protein.
 
     0.779
SDJ74405.1
Putative beta-lactamase-inhibitor-like, PepSY-like.
  
     0.677
SDJ21677.1
Protein of unknown function.
  
     0.523
SDJ87442.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.520
SDI55780.1
Hypothetical protein.
  
     0.494
SDJ21650.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.483
Your Current Organism:
Chryseobacterium jejuense
NCBI taxonomy Id: 445960
Other names: C. jejuense, Chryseobacterium jejuense Weon et al. 2008 emend. Montero-Calasanz et al. 2014, Chryseobacterium jejuense Weon et al. 2008 emend. Wu et al. 2013, Chryseobacterium sp. JS17-8, DSM 19299, KACC 12501, strain JS17-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.