Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI63167.1 | SDI63226.1 | SAMN05421542_1544 | SAMN05421542_1546 | Protein N-acetyltransferase, RimJ/RimL family. | Four helix bundle protein. | 0.625 |
SDI63167.1 | erpA | SAMN05421542_1544 | SAMN05421542_1542 | Protein N-acetyltransferase, RimJ/RimL family. | Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family. | 0.577 |
SDI63167.1 | sufB | SAMN05421542_1544 | SAMN05421542_1543 | Protein N-acetyltransferase, RimJ/RimL family. | Iron-regulated ABC transporter membrane component SufB. | 0.773 |
SDI63167.1 | sufC | SAMN05421542_1544 | SAMN05421542_1545 | Protein N-acetyltransferase, RimJ/RimL family. | Fe-S cluster assembly ATP-binding protein. | 0.718 |
SDI63167.1 | sufD | SAMN05421542_1544 | SAMN05421542_1547 | Protein N-acetyltransferase, RimJ/RimL family. | Iron-regulated ABC transporter permease protein SufD. | 0.537 |
SDI63226.1 | SDI63167.1 | SAMN05421542_1546 | SAMN05421542_1544 | Four helix bundle protein. | Protein N-acetyltransferase, RimJ/RimL family. | 0.625 |
SDI63226.1 | SDI92356.1 | SAMN05421542_1546 | SAMN05421542_2263 | Four helix bundle protein. | Four helix bundle protein. | 0.773 |
SDI63226.1 | SDJ08374.1 | SAMN05421542_1546 | SAMN05421542_2580 | Four helix bundle protein. | Four helix bundle protein. | 0.753 |
SDI63226.1 | SDJ13388.1 | SAMN05421542_1546 | SAMN05421542_2761 | Four helix bundle protein. | Four helix bundle protein. | 0.414 |
SDI63226.1 | SDJ88425.1 | SAMN05421542_1546 | SAMN05421542_4588 | Four helix bundle protein. | Four helix bundle protein. | 0.430 |
SDI63226.1 | erpA | SAMN05421542_1546 | SAMN05421542_1542 | Four helix bundle protein. | Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family. | 0.473 |
SDI63226.1 | sufB | SAMN05421542_1546 | SAMN05421542_1543 | Four helix bundle protein. | Iron-regulated ABC transporter membrane component SufB. | 0.625 |
SDI63226.1 | sufC | SAMN05421542_1546 | SAMN05421542_1545 | Four helix bundle protein. | Fe-S cluster assembly ATP-binding protein. | 0.671 |
SDI63226.1 | sufD | SAMN05421542_1546 | SAMN05421542_1547 | Four helix bundle protein. | Iron-regulated ABC transporter permease protein SufD. | 0.658 |
SDI92356.1 | SDI63226.1 | SAMN05421542_2263 | SAMN05421542_1546 | Four helix bundle protein. | Four helix bundle protein. | 0.773 |
SDI92356.1 | SDJ08374.1 | SAMN05421542_2263 | SAMN05421542_2580 | Four helix bundle protein. | Four helix bundle protein. | 0.744 |
SDJ08374.1 | SDI63226.1 | SAMN05421542_2580 | SAMN05421542_1546 | Four helix bundle protein. | Four helix bundle protein. | 0.753 |
SDJ08374.1 | SDI92356.1 | SAMN05421542_2580 | SAMN05421542_2263 | Four helix bundle protein. | Four helix bundle protein. | 0.744 |
SDJ13388.1 | SDI63226.1 | SAMN05421542_2761 | SAMN05421542_1546 | Four helix bundle protein. | Four helix bundle protein. | 0.414 |
SDJ88425.1 | SDI63226.1 | SAMN05421542_4588 | SAMN05421542_1546 | Four helix bundle protein. | Four helix bundle protein. | 0.430 |
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