Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI26726.1 | SDI64987.1 | SAMN05421542_0643 | SAMN05421542_1605 | Hypothetical protein. | Outer membrane protein beta-barrel domain-containing protein. | 0.428 |
SDI26726.1 | SDI65090.1 | SAMN05421542_0643 | SAMN05421542_1608 | Hypothetical protein. | Hypothetical protein. | 0.702 |
SDI64962.1 | SDI64987.1 | SAMN05421542_1604 | SAMN05421542_1605 | Hypothetical protein. | Outer membrane protein beta-barrel domain-containing protein. | 0.466 |
SDI64987.1 | SDI26726.1 | SAMN05421542_1605 | SAMN05421542_0643 | Outer membrane protein beta-barrel domain-containing protein. | Hypothetical protein. | 0.428 |
SDI64987.1 | SDI64962.1 | SAMN05421542_1605 | SAMN05421542_1604 | Outer membrane protein beta-barrel domain-containing protein. | Hypothetical protein. | 0.466 |
SDI64987.1 | SDI65090.1 | SAMN05421542_1605 | SAMN05421542_1608 | Outer membrane protein beta-barrel domain-containing protein. | Hypothetical protein. | 0.633 |
SDI64987.1 | SDI86785.1 | SAMN05421542_1605 | SAMN05421542_2075 | Outer membrane protein beta-barrel domain-containing protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.429 |
SDI64987.1 | SDJ39241.1 | SAMN05421542_1605 | SAMN05421542_3411 | Outer membrane protein beta-barrel domain-containing protein. | Periplasmic chaperone for outer membrane proteins Skp. | 0.500 |
SDI64987.1 | SDJ55230.1 | SAMN05421542_1605 | SAMN05421542_3776 | Outer membrane protein beta-barrel domain-containing protein. | Acetyltransferase (GNAT) domain-containing protein. | 0.424 |
SDI64987.1 | iutA_4 | SAMN05421542_1605 | SAMN05421542_0529 | Outer membrane protein beta-barrel domain-containing protein. | Iron complex outermembrane recepter protein. | 0.474 |
SDI64987.1 | lytR_8 | SAMN05421542_1605 | SAMN05421542_1607 | Outer membrane protein beta-barrel domain-containing protein. | Two component transcriptional regulator, LytTR family. | 0.553 |
SDI64987.1 | rpmF | SAMN05421542_1605 | SAMN05421542_3642 | Outer membrane protein beta-barrel domain-containing protein. | Large subunit ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.455 |
SDI64987.1 | yehU_6 | SAMN05421542_1605 | SAMN05421542_1606 | Outer membrane protein beta-barrel domain-containing protein. | GHKL domain-containing protein. | 0.553 |
SDI65090.1 | SDI26726.1 | SAMN05421542_1608 | SAMN05421542_0643 | Hypothetical protein. | Hypothetical protein. | 0.702 |
SDI65090.1 | SDI64987.1 | SAMN05421542_1608 | SAMN05421542_1605 | Hypothetical protein. | Outer membrane protein beta-barrel domain-containing protein. | 0.633 |
SDI65090.1 | SDI86785.1 | SAMN05421542_1608 | SAMN05421542_2075 | Hypothetical protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.536 |
SDI65090.1 | iutA_4 | SAMN05421542_1608 | SAMN05421542_0529 | Hypothetical protein. | Iron complex outermembrane recepter protein. | 0.428 |
SDI86785.1 | SDI64987.1 | SAMN05421542_2075 | SAMN05421542_1605 | Outer membrane receptor proteins, mostly Fe transport. | Outer membrane protein beta-barrel domain-containing protein. | 0.429 |
SDI86785.1 | SDI65090.1 | SAMN05421542_2075 | SAMN05421542_1608 | Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.536 |
SDJ39241.1 | SDI64987.1 | SAMN05421542_3411 | SAMN05421542_1605 | Periplasmic chaperone for outer membrane proteins Skp. | Outer membrane protein beta-barrel domain-containing protein. | 0.500 |
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