STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI82739.1Transcriptional regulator, AraC family. (294 aa)    
Predicted Functional Partners:
kmo
Tetracycline resistance monooxygenase.
 
     0.815
SDJ15797.1
Uncharacterized protein, contains a NRPS condensation (elongation) domain.
  
     0.765
SDJ15831.1
Condensation domain-containing protein.
  
     0.764
SDJ15720.1
Acyl carrier protein.
  
     0.739
oleD
Glycosyltransferase, MGT family.
  
     0.729
SDJ64972.1
Hypothetical protein.
  
     0.715
pksN
Acyl transferase domain-containing protein; Belongs to the P-Pant transferase superfamily.
  
     0.696
SDI94047.1
Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist.
  
     0.673
SDI82712.1
Uncharacterized conserved protein PhnB, glyoxalase superfamily.
  
    0.669
SDI82784.1
Hypothetical protein.
 
     0.635
Your Current Organism:
Chryseobacterium jejuense
NCBI taxonomy Id: 445960
Other names: C. jejuense, Chryseobacterium jejuense Weon et al. 2008 emend. Montero-Calasanz et al. 2014, Chryseobacterium jejuense Weon et al. 2008 emend. Wu et al. 2013, Chryseobacterium sp. JS17-8, DSM 19299, KACC 12501, strain JS17-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.