Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI55805.1 | pepC | SAMN05421542_1293 | SAMN05421542_2741 | Hypothetical protein. | Bleomycin hydrolase; Belongs to the peptidase C1 family. | 0.431 |
SDJ12714.1 | pepC | SAMN05421542_2739 | SAMN05421542_2741 | Ca-activated chloride channel family protein. | Bleomycin hydrolase; Belongs to the peptidase C1 family. | 0.534 |
SDJ12714.1 | sigV_3 | SAMN05421542_2739 | SAMN05421542_2740 | Ca-activated chloride channel family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.773 |
nudC | pepC | SAMN05421542_4279 | SAMN05421542_2741 | NUDIX domain-containing protein. | Bleomycin hydrolase; Belongs to the peptidase C1 family. | 0.703 |
pepC | SDI55805.1 | SAMN05421542_2741 | SAMN05421542_1293 | Bleomycin hydrolase; Belongs to the peptidase C1 family. | Hypothetical protein. | 0.431 |
pepC | SDJ12714.1 | SAMN05421542_2741 | SAMN05421542_2739 | Bleomycin hydrolase; Belongs to the peptidase C1 family. | Ca-activated chloride channel family protein. | 0.534 |
pepC | nudC | SAMN05421542_2741 | SAMN05421542_4279 | Bleomycin hydrolase; Belongs to the peptidase C1 family. | NUDIX domain-containing protein. | 0.703 |
pepC | sigV_3 | SAMN05421542_2741 | SAMN05421542_2740 | Bleomycin hydrolase; Belongs to the peptidase C1 family. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.545 |
sigV_3 | SDJ12714.1 | SAMN05421542_2740 | SAMN05421542_2739 | RNA polymerase sigma-70 factor, ECF subfamily. | Ca-activated chloride channel family protein. | 0.773 |
sigV_3 | pepC | SAMN05421542_2740 | SAMN05421542_2741 | RNA polymerase sigma-70 factor, ECF subfamily. | Bleomycin hydrolase; Belongs to the peptidase C1 family. | 0.545 |