STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ19806.1Hypothetical protein. (267 aa)    
Predicted Functional Partners:
SDJ19690.1
Oxygen tolerance.
 
   
 0.891
SDJ19750.1
Ca-activated chloride channel family protein.
 
   
 0.880
SDJ19778.1
Ca-activated chloride channel family protein.
 
   
 0.869
SDJ19720.1
Tetratricopeptide repeat-containing protein.
 
     0.839
SDJ20090.1
Hypothetical protein.
 
     0.778
SDJ65165.1
Hypothetical protein.
  
     0.764
SDJ81995.1
Protein of unknown function.
  
     0.763
SDI09510.1
Hypothetical protein.
  
     0.755
SDI22411.1
Hypothetical protein.
  
     0.748
SDJ71118.1
Hypothetical protein.
  
     0.748
Your Current Organism:
Chryseobacterium jejuense
NCBI taxonomy Id: 445960
Other names: C. jejuense, Chryseobacterium jejuense Weon et al. 2008 emend. Montero-Calasanz et al. 2014, Chryseobacterium jejuense Weon et al. 2008 emend. Wu et al. 2013, Chryseobacterium sp. JS17-8, DSM 19299, KACC 12501, strain JS17-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.