Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI98429.1 | SDJ20231.1 | SAMN05421542_2480 | SAMN05421542_3000 | Bacillithiol system protein YtxJ. | Thioredoxin reductase (NADPH). | 0.685 |
SDI98429.1 | SDJ86672.1 | SAMN05421542_2480 | SAMN05421542_4539 | Bacillithiol system protein YtxJ. | N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA. | 0.444 |
SDI98429.1 | bshC | SAMN05421542_2480 | SAMN05421542_1326 | Bacillithiol system protein YtxJ. | Bacillithiol biosynthesis cysteine-adding enzyme BshC; Belongs to the BshC family. | 0.566 |
SDI98429.1 | tsaA | SAMN05421542_2480 | SAMN05421542_0901 | Bacillithiol system protein YtxJ. | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | 0.430 |
SDI98429.1 | yphP | SAMN05421542_2480 | SAMN05421542_1785 | Bacillithiol system protein YtxJ. | Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. | 0.683 |
SDJ20231.1 | SDI98429.1 | SAMN05421542_3000 | SAMN05421542_2480 | Thioredoxin reductase (NADPH). | Bacillithiol system protein YtxJ. | 0.685 |
SDJ20231.1 | SDJ86672.1 | SAMN05421542_3000 | SAMN05421542_4539 | Thioredoxin reductase (NADPH). | N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA. | 0.651 |
SDJ20231.1 | bshC | SAMN05421542_3000 | SAMN05421542_1326 | Thioredoxin reductase (NADPH). | Bacillithiol biosynthesis cysteine-adding enzyme BshC; Belongs to the BshC family. | 0.612 |
SDJ20231.1 | gcvP | SAMN05421542_3000 | SAMN05421542_1954 | Thioredoxin reductase (NADPH). | Glycine dehydrogenase; Belongs to the GcvP family. | 0.663 |
SDJ20231.1 | mccB | SAMN05421542_3000 | SAMN05421542_0325 | Thioredoxin reductase (NADPH). | Methionine-gamma-lyase. | 0.911 |
SDJ20231.1 | metC | SAMN05421542_3000 | SAMN05421542_3128 | Thioredoxin reductase (NADPH). | Cystathionine beta-lyase. | 0.911 |
SDJ20231.1 | sufS | SAMN05421542_3000 | SAMN05421542_1515 | Thioredoxin reductase (NADPH). | Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.911 |
SDJ20231.1 | trxC | SAMN05421542_3000 | SAMN05421542_0900 | Thioredoxin reductase (NADPH). | Thioredoxin. | 0.846 |
SDJ20231.1 | tsaA | SAMN05421542_3000 | SAMN05421542_0901 | Thioredoxin reductase (NADPH). | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | 0.567 |
SDJ20231.1 | yphP | SAMN05421542_3000 | SAMN05421542_1785 | Thioredoxin reductase (NADPH). | Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. | 0.710 |
SDJ86672.1 | SDI98429.1 | SAMN05421542_4539 | SAMN05421542_2480 | N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA. | Bacillithiol system protein YtxJ. | 0.444 |
SDJ86672.1 | SDJ20231.1 | SAMN05421542_4539 | SAMN05421542_3000 | N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA. | Thioredoxin reductase (NADPH). | 0.651 |
SDJ86672.1 | bshC | SAMN05421542_4539 | SAMN05421542_1326 | N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA. | Bacillithiol biosynthesis cysteine-adding enzyme BshC; Belongs to the BshC family. | 0.777 |
SDJ86672.1 | yphP | SAMN05421542_4539 | SAMN05421542_1785 | N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA. | Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. | 0.768 |
bshC | SDI98429.1 | SAMN05421542_1326 | SAMN05421542_2480 | Bacillithiol biosynthesis cysteine-adding enzyme BshC; Belongs to the BshC family. | Bacillithiol system protein YtxJ. | 0.566 |
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