STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ35436.1Polysaccharide export outer membrane protein. (273 aa)    
Predicted Functional Partners:
ptk
Capsular exopolysaccharide family.
 
 0.999
SDJ93005.1
Capsular exopolysaccharide family.
 
 0.999
capD
UDP-glucose 4-epimerase; NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
  
 
 0.933
SDJ92967.1
Protein involved in gliding motility EpsA.
  
  
 
0.918
yadH
Lipopolysaccharide transport system permease protein.
  
 
 0.836
tagH
Lipopolysaccharide transport system ATP-binding protein.
  
 
 0.834
wcaJ_3
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
 
 0.746
wcaJ_2
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
 
 0.718
tuaD_1
UDP-N-acetyl-D-galactosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.716
wcaJ_1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
 
 0.695
Your Current Organism:
Chryseobacterium jejuense
NCBI taxonomy Id: 445960
Other names: C. jejuense, Chryseobacterium jejuense Weon et al. 2008 emend. Montero-Calasanz et al. 2014, Chryseobacterium jejuense Weon et al. 2008 emend. Wu et al. 2013, Chryseobacterium sp. JS17-8, DSM 19299, KACC 12501, strain JS17-8
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.