STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ55633.1Thiol-disulfide isomerase or thioredoxin. (171 aa)    
Predicted Functional Partners:
msrAB
Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.971
SDI98956.1
Protein of unknown function.
    
 0.785
tsaA
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
  
 0.696
SDJ43415.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
  
 0.696
nrdE2
Ribonucleoside-diphosphate reductase alpha chain.
 
 
 0.669
mrsA
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.642
SDI24910.1
Dihydrolipoamide dehydrogenase.
   
 0.638
SDI87688.1
Dihydrolipoamide dehydrogenase.
   
 0.638
lpd
Dihydrolipoamide dehydrogenase.
   
 0.638
sodC
Superoxide dismutase, Cu-Zn family.
    
 0.633
Your Current Organism:
Chryseobacterium jejuense
NCBI taxonomy Id: 445960
Other names: C. jejuense, Chryseobacterium jejuense Weon et al. 2008 emend. Montero-Calasanz et al. 2014, Chryseobacterium jejuense Weon et al. 2008 emend. Wu et al. 2013, Chryseobacterium sp. JS17-8, DSM 19299, KACC 12501, strain JS17-8
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