STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IW15_01735Fe-S-oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)    
Predicted Functional Partners:
IW15_01740
Inward rectifier potassium channel Irk; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
IW15_07535
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.653
IW15_00380
30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.560
IW15_11890
Mevalonate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.555
IW15_13670
Gliding motility protein GldN; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.540
IW15_01745
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.521
IW15_01730
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.510
ribB-2
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
   
   0.500
IW15_13575
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.498
IW15_21790
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.497
Your Current Organism:
Chryseobacterium soli
NCBI taxonomy Id: 445961
Other names: C. soli, Chryseobacterium soli Weon et al. 2008 emend. Hahnke et al. 2016, Chryseobacterium sp. JS6-6, DSM 19298, KACC 12502, strain JS6-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.