Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
IW15_02145 | IW15_06480 | IW15_02145 | IW15_06480 | Thiol peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Mrp; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.441 |
IW15_02145 | IW15_19220 | IW15_02145 | IW15_19220 | Thiol peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.442 |
IW15_02145 | IW15_22000 | IW15_02145 | IW15_22000 | Thiol peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Thioredoxin peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.702 |
IW15_02145 | nth | IW15_02145 | IW15_02140 | Thiol peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.686 |
IW15_06480 | IW15_02145 | IW15_06480 | IW15_02145 | Mrp; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | Thiol peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.441 |
IW15_19220 | IW15_02145 | IW15_19220 | IW15_02145 | Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Thiol peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.442 |
IW15_19220 | IW15_22000 | IW15_19220 | IW15_22000 | Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Thioredoxin peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.785 |
IW15_22000 | IW15_02145 | IW15_22000 | IW15_02145 | Thioredoxin peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Thiol peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.702 |
IW15_22000 | IW15_19220 | IW15_22000 | IW15_19220 | Thioredoxin peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.785 |
nth | IW15_02145 | IW15_02140 | IW15_02145 | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | Thiol peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.686 |