STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IW15_06035Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa)    
Predicted Functional Partners:
IW15_07715
Transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.683
valS
valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
       0.662
IW15_05640
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.601
IW15_06030
Polyphosphate:nucleotide phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.563
IW15_14565
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.516
IW15_09215
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.498
IW15_07195
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.489
IW15_00940
uroporphyrinogen-III synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.479
IW15_09995
Doxx family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.465
IW15_18450
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.461
Your Current Organism:
Chryseobacterium soli
NCBI taxonomy Id: 445961
Other names: C. soli, Chryseobacterium soli Weon et al. 2008 emend. Hahnke et al. 2016, Chryseobacterium sp. JS6-6, DSM 19298, KACC 12502, strain JS6-6
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.