STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IW15_08160Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (120 aa)    
Predicted Functional Partners:
IW15_16195
Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.667
IW15_00645
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.631
IW15_03550
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.531
IW15_08145
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.523
IW15_08150
Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
       0.523
IW15_08155
Thiol-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.523
IW15_06450
Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.498
IW15_03745
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.476
IW15_20445
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.463
IW15_08140
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.455
Your Current Organism:
Chryseobacterium soli
NCBI taxonomy Id: 445961
Other names: C. soli, Chryseobacterium soli Weon et al. 2008 emend. Hahnke et al. 2016, Chryseobacterium sp. JS6-6, DSM 19298, KACC 12502, strain JS6-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.