STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IW15_09510Gliding motility protein GldD; Derived by automated computational analysis using gene prediction method: Protein Homology. (185 aa)    
Predicted Functional Partners:
IW15_18480
Gliding motility protein GldJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.899
IW15_13680
Gliding motility protein GldL; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.880
IW15_13685
Gliding motility protein Gldk; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.873
IW15_13670
Gliding motility protein GldN; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.865
IW15_04370
Gliding motility protein GldG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.861
IW15_06750
Gliding motility protein GldB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.842
IW15_02400
Gliding motility protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.832
IW15_13675
Gliding motility protein GldM; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.820
IW15_14850
Gliding motility protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.781
IW15_20725
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.767
Your Current Organism:
Chryseobacterium soli
NCBI taxonomy Id: 445961
Other names: C. soli, Chryseobacterium soli Weon et al. 2008 emend. Hahnke et al. 2016, Chryseobacterium sp. JS6-6, DSM 19298, KACC 12502, strain JS6-6
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.