STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IW15_16330Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)    
Predicted Functional Partners:
IW15_16340
Molybdenum cofactor biosynthesis protein MoaE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.832
IW15_16335
Molybdopterin converting factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.797
fdhD
Formate dehydrogenase; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
       0.564
IW15_16355
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.527
IW15_16385
Molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
     0.505
IW15_16350
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.500
IW15_00145
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.453
IW15_16390
Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
 
     0.451
IW15_16360
Molybdopterin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.443
mobA
Molybdenum cofactor biosynthesis protein MoaC; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.
 
     0.439
Your Current Organism:
Chryseobacterium soli
NCBI taxonomy Id: 445961
Other names: C. soli, Chryseobacterium soli Weon et al. 2008 emend. Hahnke et al. 2016, Chryseobacterium sp. JS6-6, DSM 19298, KACC 12502, strain JS6-6
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