STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS72920.1Hypothetical protein; KEGG: mpe:MYPE6470 5.1e-40 parC; DNA topoisomerase IV subunit A K02621; COG: COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; Psort location: Cellwall, score: 9.93. (844 aa)    
Predicted Functional Partners:
EDS72921.1
Hypothetical protein; COG: COG1578 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87.
       0.510
hxlB
6-phospho 3-hexuloisomerase; KEGG: oih:OB2807 2.6e-37 hypothetical protein K08094; COG: COG0794 Predicted sugar phosphate isomerase involved in capsule formation; Psort location: Cytoplasmic, score: 8.87.
       0.510
EDS72023.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bat:BAS2057 1.8e-47 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.457
lepA
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
  
     0.454
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
  
     0.410
EDS72923.1
Hypothetical protein; KEGG: pfa:PF14_0370 0.0030 RNA helicase, putative K01509.
       0.402
Your Current Organism:
Anaerofustis stercorihominis
NCBI taxonomy Id: 445971
Other names: A. stercorihominis DSM 17244, Anaerofustis stercorihominis DSM 17244, Anaerofustis stercorihominis str. DSM 17244, Anaerofustis stercorihominis strain DSM 17244
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