STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS71387.1Hypothetical protein; KEGG: pub:SAR11_0323 4.0e-05 ubiH; putative ubiquinone biosynthesis monooxgenase COQ6 K03185; COG: COG3858 Predicted glycosyl hydrolase; Psort location: Cytoplasmic, score: 8.87. (345 aa)    
Predicted Functional Partners:
EDS71388.1
4Fe-4S binding domain protein; KEGG: tte:TTE0894 2.6e-69 nuoG; NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) K00336; COG: COG4624 Iron only hydrogenase large subunit, C-terminal domain; Psort location: Cytoplasmic, score: 8.87.
  
    0.671
EDS71389.1
Respiratory-chain NADH dehydrogenase 51 Kd subunit; KEGG: tma:TM0228 1.3e-90 NADH dehydrogenase I chain F K00335; COG: COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; Psort location: Cytoplasmic, score: 9.98.
       0.661
EDS71390.1
KEGG: tko:TK1614 1.5e-25 NADH:ubiquinone oxidoreductase, subunit E K00334; COG: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; Psort location: Cytoplasmic, score: 9.98.
       0.661
EDS71386.1
Glycyl-radical enzyme activating protein family protein; KEGG: ecc:c4538 6.6e-48 putative pyruvate formate-lyase 3 activating enzyme K04069; COG: COG1180 Pyruvate-formate lyase-activating enzyme; Psort location: Cytoplasmic, score: 9.98.
       0.465
nfo
Apurinic endonuclease (APN1); Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.
       0.435
EDS71392.1
KEGG: cac:CAC1090 4.0e-34 5-formyltetrahydrofolate cyclo-ligase K01934; COG: COG0212 5-formyltetrahydrofolate cyclo-ligase; Psort location: Cytoplasmic, score: 8.87.
       0.433
Your Current Organism:
Anaerofustis stercorihominis
NCBI taxonomy Id: 445971
Other names: A. stercorihominis DSM 17244, Anaerofustis stercorihominis DSM 17244, Anaerofustis stercorihominis str. DSM 17244, Anaerofustis stercorihominis strain DSM 17244
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