STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS71469.1CobW/P47K family protein; KEGG: reh:H16_A0195 1.6e-37 putative GTPase (G3E family); COG: COG0523 Putative GTPases (G3E family); Psort location: Cytoplasmic, score: 8.87. (427 aa)    
Predicted Functional Partners:
EDS71467.1
Putative TIGR03943 family protein; COG: COG3689 Predicted membrane protein; Psort location: Cytoplasmic, score: 8.87.
 
    
0.867
EDS72323.1
Hypothetical protein.
  
     0.686
map
Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
    
   0.622
rpsN
Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
 
 0.600
EDS71468.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.572
rpmB
COG: COG0227 Ribosomal protein L28; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.487
EDS71465.1
O-methyltransferase; KEGG: cpe:CPE1772 2.7e-42 probable O-methyltransferase K00599; COG: COG4122 Predicted O-methyltransferase; Psort location: Cytoplasmic, score: 8.87.
       0.470
mltG
YceG family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
       0.470
hisE
phosphoribosyl-ATP diphosphatase; KEGG: bth:BT1377 3.9e-50 phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase K01496:K01523; COG: COG0139 Phosphoribosyl-AMP cyclohydrolase; Psort location: Cytoplasmic, score: 9.65; In the N-terminal section; belongs to the PRA-CH family.
     
 0.444
EDS72654.1
Sugar-binding domain protein; KEGG: efa:EF1922 6.0e-14 transcriptional regulator, LacI family/carbohydrate kinase, PfkB family protein K00852; COG: COG1609 Transcriptional regulators; Psort location: Cytoplasmic, score: 9.98.
   
   0.401
Your Current Organism:
Anaerofustis stercorihominis
NCBI taxonomy Id: 445971
Other names: A. stercorihominis DSM 17244, Anaerofustis stercorihominis DSM 17244, Anaerofustis stercorihominis str. DSM 17244, Anaerofustis stercorihominis strain DSM 17244
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