STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS71543.1Hypothetical protein; KEGG: pub:SAR11_0852 3.0e-43 predicted homoserine dehydrogenase K00003; COG: COG4091 Predicted homoserine dehydrogenase; Psort location: Cytoplasmic, score: 8.87. (430 aa)    
Predicted Functional Partners:
srlA
KEGG: bcl:ABC1157 3.5e-42 PTS system, glucitol/sorbitol-specific enzyme II, C2 component K02782:K02783; COG: COG3730 Phosphotransferase system sorbitol-specific component IIC; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.699
EDS73433.1
PTS system glucitol/sorbitol-specific IIA component; KEGG: bcl:ABC1159 8.0e-20 PTS system, glucitol-specific enzyme III K02781; COG: COG3731 Phosphotransferase system sorbitol-specific component IIA; Psort location: Cytoplasmic, score: 8.87.
 
    0.662
EDS73434.1
KEGG: bha:BH0772 4.1e-103 PTS system, glucitol/sorbitol-specific enzyme II, BC component (EIIBC-GUT) K02782:K02783; COG: COG3732 Phosphotransferase system sorbitol-specific component IIBC; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.661
EDS73436.1
Glucitol operon activator protein (GutM); COG: NOG18560 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.75.
 
    0.650
EDS71544.1
DNA-binding helix-turn-helix protein; KEGG: mmo:MMOB3450 0.0037 dam; adenine-specific DNA methyltransferase K06223; COG: NOG16841 non supervised orthologous group.
       0.478
EDS71542.1
Peptidase, S41 family; KEGG: cac:CAC0499 4.8e-61 carboxyl-terminal protease K03797; COG: COG0793 Periplasmic protease; Belongs to the peptidase S41A family.
       0.442
EDS71540.1
HAD hydrolase, family IA, variant 1; KEGG: bar:GBAA2220 1.1e-36 hydrolase, haloacid dehalogenase-like family K01091; COG: COG0546 Predicted phosphatases; Psort location: Cytoplasmic, score: 8.87.
       0.424
EDS71541.1
KEGG: cac:CAC0418 3.7e-38 predicted phosphatase, HAD family K01091; COG: COG0546 Predicted phosphatases; Psort location: Cytoplasmic, score: 8.87.
       0.424
Your Current Organism:
Anaerofustis stercorihominis
NCBI taxonomy Id: 445971
Other names: A. stercorihominis DSM 17244, Anaerofustis stercorihominis DSM 17244, Anaerofustis stercorihominis str. DSM 17244, Anaerofustis stercorihominis strain DSM 17244
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