STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS72065.1Transcriptional regulator, MarR family; KEGG: pfu:PF0989 0.0091 phenylalanyl-tRNA synthetase alpha chain K01889; COG: COG1846 Transcriptional regulators. (143 aa)    
Predicted Functional Partners:
EDS72066.1
Hypothetical protein; COG: COG0730 Predicted permeases; Psort location: CytoplasmicMembrane, score: 9.99.
       0.618
EDS72064.1
Putative YbaK/EbsC protein; COG: COG2606 Uncharacterized conserved protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
  
    0.598
EDS72067.1
COG: COG4739 Uncharacterized protein containing a ferredoxin domain; Psort location: Cytoplasmic, score: 8.87.
       0.598
EDS72061.1
Transcriptional regulator, AbrB family; KEGG: mmo:MMOB3450 0.00017 dam; adenine-specific DNA methyltransferase K06223; COG: COG2002 Regulators of stationary/sporulation gene expression; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.409
EDS72062.1
KEGG: lwe:lwe1990 4.7e-31 ABC transporter, ATP-binding protein K06020; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.82.
  
    0.409
EDS72063.1
Hypothetical protein; KEGG: bas:BUsg452 0.00013 cyoE; protoheme IX farnesyltransferase K02301; COG: NOG31558 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
       0.405
Your Current Organism:
Anaerofustis stercorihominis
NCBI taxonomy Id: 445971
Other names: A. stercorihominis DSM 17244, Anaerofustis stercorihominis DSM 17244, Anaerofustis stercorihominis str. DSM 17244, Anaerofustis stercorihominis strain DSM 17244
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.