STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS72078.1DNA-binding helix-turn-helix protein; COG: COG1396 Predicted transcriptional regulators; Psort location: CytoplasmicMembrane, score: 9.99. (225 aa)    
Predicted Functional Partners:
EDS73604.1
DNA-binding helix-turn-helix protein; COG: COG1396 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
  
     0.774
EDS73449.1
DNA-binding helix-turn-helix protein; COG: COG1396 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
  
     0.767
EDS72137.1
DNA-binding helix-turn-helix protein; KEGG: mmo:MMOB3450 0.0070 dam; adenine-specific DNA methyltransferase K06223; COG: COG1396 Predicted transcriptional regulators; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.766
EDS71544.1
DNA-binding helix-turn-helix protein; KEGG: mmo:MMOB3450 0.0037 dam; adenine-specific DNA methyltransferase K06223; COG: NOG16841 non supervised orthologous group.
  
     0.761
cinA
Competence/damage-inducible domain protein CinA; KEGG: mmu:319945 6.8e-08 Flad1; RFad1, flavin adenine dinucleotide synthetase, homolog (yeast) K00953; COG: COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Psort location: Cytoplasmic, score: 8.87; Belongs to the CinA family.
    
 0.699
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
  0.683
EDS72910.1
DNA-binding helix-turn-helix protein; COG: COG1396 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
  
     0.652
EDS72079.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.485
EDS72647.1
DNA-binding helix-turn-helix protein; COG: NOG16841 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.484
Your Current Organism:
Anaerofustis stercorihominis
NCBI taxonomy Id: 445971
Other names: A. stercorihominis DSM 17244, Anaerofustis stercorihominis DSM 17244, Anaerofustis stercorihominis str. DSM 17244, Anaerofustis stercorihominis strain DSM 17244
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.