STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS72465.1Sigma-54 interaction domain protein; KEGG: eci:UTI89_C2502 9.5e-17 atoC; acetoacetate metabolism regulatory protein AtoC K07714; COG: COG3933 Transcriptional antiterminator; Psort location: Cytoplasmic, score: 8.87. (916 aa)    
Predicted Functional Partners:
EDS71515.1
Putative RNA polymerase sigma-54 factor; KEGG: reh:H16_A0387 2.6e-27 rpoN; DNA-directed RNA polymerase sigma subunit (RpoN) K00960; COG: COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog.
 
 
 
 0.948
EDS71516.1
Sigma-54 factor, Activator interacting domain (AID); KEGG: reh:H16_A0387 9.7e-05 rpoN; DNA-directed RNA polymerase sigma subunit (RpoN) K00960; COG: COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog; Psort location: Cytoplasmic, score: 8.87.
 
 
 
 0.843
EDS72463.1
PTS system sorbose subfamily IIB component; KEGG: spt:SPA3621 6.6e-32 putative PTS system protein K02794; COG: COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB; Psort location: Cytoplasmic, score: 9.98.
 
  
 0.765
EDS72462.1
KEGG: lsl:LSL_1950 1.8e-31 PTS system, mannose-specific IIC component K00890; COG: COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.755
EDS72464.1
PTS system fructose IIA component; KEGG: lmo:lmo0784 4.8e-22 similar to mannose-specific phosphotransferase system (PTS) component IIA K02793; COG: COG2893 Phosphotransferase system, mannose/fructose-specific component IIA; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.750
EDS72461.1
PTS system mannose/fructose/sorbose family IID component; KEGG: hso:HS_0607 7.6e-47 manZ; protein-N(pi)-phosphohistidine-sugar phosphotransferase (mannose-specific phosphotransferase system IID component) K02796; COG: COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.737
EDS72883.1
HTH domain protein; KEGG: spz:M5005_Spy_1083 1.6e-26 PTS system, mannitol (cryptic)-specific IIA component K03491; COG: COG3711 Transcriptional antiterminator; Psort location: CytoplasmicMembrane, score: 7.80.
 
   
 0.733
EDS71903.1
KEGG: bat:BAS3563 5.1e-176 PTS system, fructose-specific IIABC component K02768:K02769:K02770; COG: COG1299 Phosphotransferase system, fructose-specific IIC component; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.679
EDS72452.1
PTS system sorbose-specific iic component; KEGG: eci:UTI89_C2015 7.5e-24 manY; PTS enzyme IIC, mannose-specific K02795; COG: COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.664
EDS72451.1
KEGG: lsl:LSL_1949 1.9e-25 PTS system, mannose-specific IID component K00890; COG: COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.621
Your Current Organism:
Anaerofustis stercorihominis
NCBI taxonomy Id: 445971
Other names: A. stercorihominis DSM 17244, Anaerofustis stercorihominis DSM 17244, Anaerofustis stercorihominis str. DSM 17244, Anaerofustis stercorihominis strain DSM 17244
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