STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEA91377.1IstB-like ATP-binding protein; KEGG: spi:MGAS10750_Spy1680 0.0056 replicative DNA helicase K01529; Psort location: Cytoplasmic, score: 8.87. (244 aa)    
Predicted Functional Partners:
dnaB
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.821
EEA90064.1
Helix-turn-helix domain of resolvase; Psort location: Cytoplasmic, score: 8.87.
  
 0.802
EEA90067.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 0.796
EEA89707.1
Integrase core domain protein; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.782
EEA89300.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 0.781
EEA91378.1
Hypothetical protein; KEGG: mag:amb0328 0.0060 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase K03215; Psort location: CytoplasmicMembrane, score: 9.76.
       0.773
EEA89255.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.772
EEA90714.1
Integrase core domain protein; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.719
EEA91375.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.645
EEA89663.1
Putative chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.
    
 
 0.549
Your Current Organism:
Collinsella stercoris
NCBI taxonomy Id: 445975
Other names: C. stercoris DSM 13279, Collinsella stercoris DSM 13279, Collinsella stercoris str. DSM 13279, Collinsella stercoris strain DSM 13279
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.