STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tadAGlycerate kinase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (647 aa)    
Predicted Functional Partners:
EEA90160.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: cpr:CPR_2540 3.6e-285 aldehyde-alcohol dehydrogenase [includes: alcohol K00001:K04072; Psort location: Cytoplasmic, score: 9.98; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.926
EEA91433.1
Inosine guanosine and xanthosine phosphorylase family; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
 0.875
EEA90901.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: cte:CT0282 5.8e-73 glutamate synthase (NADPH) small chain K00266; Psort location: Cytoplasmic, score: 9.98.
    
  0.874
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
   
 0.873
pyrR
Pyrimidine operon regulatory protein/uracil phosphoribosyltransferase PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
 
  
  0.851
xth
Exodeoxyribonuclease III; KEGG: cpr:CPR_1192 3.9e-82 xth; exodeoxyribonuclease III K01142; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.841
pdp
KEGG: sth:STH1039 6.2e-116 pyrimidine nucleoside phosphorylase K00756; Psort location: Cytoplasmic, score: 8.87.
    
  0.827
rimI
Ribosomal-protein-alanine acetyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
  
 0.779
EEA89348.1
KEGG: dde:Dde_2654 2.2e-24 biotin--acetyl-CoA-carboxylase ligase K03524:K01947; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.768
pyrD
Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate.
    
 0.730
Your Current Organism:
Collinsella stercoris
NCBI taxonomy Id: 445975
Other names: C. stercoris DSM 13279, Collinsella stercoris DSM 13279, Collinsella stercoris str. DSM 13279, Collinsella stercoris strain DSM 13279
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