Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tadAGlycerate kinase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (647 aa)    
Predicted Functional Partners:
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
 
 0.914
EEA89348.1
KEGG: dde:Dde_2654 2.2e-24 biotin--acetyl-CoA-carboxylase ligase K03524:K01947; Psort location: Cytoplasmic, score: 8.87.
 
    0.771
rimI
Ribosomal-protein-alanine acetyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
  
 0.721
hisE
KEGG: neu:NE0641 3.1e-18 hisE; phosphoribosyl-ATP pyrophosphohydrolase K01523; Psort location: Cytoplasmic, score: 8.87.
   
  
 0.720
EEA90509.1
ATPase family associated with various cellular activities (AAA); KEGG: fal:FRAAL6680 6.5e-215 clpB; ATP-dependent protease, HSP 100, part of multi-chaperone system with DnaK, DnaJ, and GrpE K03696; Psort location: Cytoplasmic, score: 9.98; Belongs to the ClpA/ClpB family.
 
 
 0.686
EEA89874.1
Nitroreductase family protein; KEGG: fnu:FN1254 2.1e-19 oxygen-insensitive NAD(P)H nitroreductase / dihydropteridine reductase K00357; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.669
clpB
ATP-dependent chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
 
 
 0.665
EEA91305.1
Glyoxalase family protein; KEGG: bme:BMEII0064 1.4e-08 lactoylglutathione lyase K01759; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.645
EEA90186.1
Glyoxalase family protein; KEGG: fnu:FN0356 5.4e-30 lactoylglutathione lyase K01759; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.645
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
 
  
 0.586
Your Current Organism:
Collinsella stercoris
NCBI taxonomy Id: 445975
Other names: C. stercoris DSM 13279, Collinsella stercoris DSM 13279, Collinsella stercoris str. DSM 13279, Collinsella stercoris strain DSM 13279
Server load: low (24%) [HD]