STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
feoB-2Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. (830 aa)    
Predicted Functional Partners:
EEA90627.1
FeoA domain protein; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.762
EEA90628.1
FeoA domain protein.
 
  
0.708
feoB
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
 
  
0.693
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
     
 0.684
topA
DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...]
      
 0.567
EEA90401.1
Transcriptional regulator, Fur family; Psort location: Cytoplasmic, score: 8.87; Belongs to the Fur family.
     
 0.509
hisG
ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.
  
  
 0.500
EEA91449.1
4Fe-4S binding domain protein; KEGG: mka:MK0323 3.9e-09 fwd_F2; probable formylmethanofuran dehydrogenase subunit F, ferredoxin containing K00199; Psort location: Cytoplasmic, score: 8.87.
     
 0.490
sufC
FeS assembly ATPase SufC; KEGG: reh:H16_B1513 9.8e-54 sufC; iron sulfur cluster assembly protein (SufC),ABC-type transporter ATPase component: Fe-S family; Psort location: CytoplasmicMembrane, score: 9.49.
     
 0.472
EEA91581.1
NifU-like protein; Psort location: Cytoplasmic, score: 8.87.
     
 0.469
Your Current Organism:
Collinsella stercoris
NCBI taxonomy Id: 445975
Other names: C. stercoris DSM 13279, Collinsella stercoris DSM 13279, Collinsella stercoris str. DSM 13279, Collinsella stercoris strain DSM 13279
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.