STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iadAIsoaspartyl dipeptidase. (381 aa)    
Predicted Functional Partners:
SCI95680.1
Putative p-aminobenzoyl-glutamate transporter.
 
     0.813
SCJ29657.1
Arginase/agmatinase/formimionoglutamate hydrolase%2C arginase family.
  
 
 0.633
SCI95731.1
Transcriptional regulator SlyA.
  
    0.519
upp
Uracil phosphoribosyltransferase.
  
  
  0.497
fchA
Methenyltetrahydrofolate cyclohydrolase.
  
 
  0.421
Your Current Organism:
uncultured Lachnospira sp.
NCBI taxonomy Id: 446043
Other names: u. Lachnospira sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.