Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCJ17588.1 | prfA | SAMEA3545430_00855 | SAMEA3545430_00857 | Predicted metal-dependent enzyme. | Peptide chain release factor 1. | 0.734 |
SCJ17588.1 | prmC | SAMEA3545430_00855 | SAMEA3545430_00856 | Predicted metal-dependent enzyme. | Release factor glutamine methyltransferase. | 0.929 |
SCJ17588.1 | rpmE | SAMEA3545430_00855 | SAMEA3545430_00854 | Predicted metal-dependent enzyme. | 50S ribosomal protein L31. | 0.706 |
atpA_1 | atpC | SAMEA3545430_00494 | SAMEA3545430_00491 | ATP synthase subunit alpha. | F-ATPase epsilon subunit. | 0.999 |
atpA_1 | atpD_1 | SAMEA3545430_00494 | SAMEA3545430_00492 | ATP synthase subunit alpha. | ATP synthase subunit beta. | 0.999 |
atpA_1 | atpE | SAMEA3545430_00494 | SAMEA3545430_00497 | ATP synthase subunit alpha. | Lipid-binding protein. | 0.999 |
atpA_1 | atpG | SAMEA3545430_00494 | SAMEA3545430_00493 | ATP synthase subunit alpha. | Na(+)-translocating ATPase gamma chain. | 0.999 |
atpA_1 | atpH | SAMEA3545430_00494 | SAMEA3545430_00495 | ATP synthase subunit alpha. | F-type ATPase subunit delta. | 0.999 |
atpA_1 | prmC | SAMEA3545430_00494 | SAMEA3545430_00856 | ATP synthase subunit alpha. | Release factor glutamine methyltransferase. | 0.645 |
atpC | atpA_1 | SAMEA3545430_00491 | SAMEA3545430_00494 | F-ATPase epsilon subunit. | ATP synthase subunit alpha. | 0.999 |
atpC | atpD_1 | SAMEA3545430_00491 | SAMEA3545430_00492 | F-ATPase epsilon subunit. | ATP synthase subunit beta. | 0.999 |
atpC | atpE | SAMEA3545430_00491 | SAMEA3545430_00497 | F-ATPase epsilon subunit. | Lipid-binding protein. | 0.999 |
atpC | atpG | SAMEA3545430_00491 | SAMEA3545430_00493 | F-ATPase epsilon subunit. | Na(+)-translocating ATPase gamma chain. | 0.999 |
atpC | atpH | SAMEA3545430_00491 | SAMEA3545430_00495 | F-ATPase epsilon subunit. | F-type ATPase subunit delta. | 0.999 |
atpC | prmC | SAMEA3545430_00491 | SAMEA3545430_00856 | F-ATPase epsilon subunit. | Release factor glutamine methyltransferase. | 0.639 |
atpD_1 | atpA_1 | SAMEA3545430_00492 | SAMEA3545430_00494 | ATP synthase subunit beta. | ATP synthase subunit alpha. | 0.999 |
atpD_1 | atpC | SAMEA3545430_00492 | SAMEA3545430_00491 | ATP synthase subunit beta. | F-ATPase epsilon subunit. | 0.999 |
atpD_1 | atpE | SAMEA3545430_00492 | SAMEA3545430_00497 | ATP synthase subunit beta. | Lipid-binding protein. | 0.999 |
atpD_1 | atpG | SAMEA3545430_00492 | SAMEA3545430_00493 | ATP synthase subunit beta. | Na(+)-translocating ATPase gamma chain. | 0.999 |
atpD_1 | atpH | SAMEA3545430_00492 | SAMEA3545430_00495 | ATP synthase subunit beta. | F-type ATPase subunit delta. | 0.999 |
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