Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCI84754.1 | SCJ08325.1 | SAMEA3545430_00119 | SAMEA3545430_00678 | DNA-directed RNA polymerase subunit omega. | Type I restriction enzyme EcoKI subunit R. | 0.988 |
SCI84754.1 | SCJ54631.1 | SAMEA3545430_00119 | SAMEA3545430_01766 | DNA-directed RNA polymerase subunit omega. | Hef nuclease. | 0.986 |
SCI84754.1 | SCJ78747.1 | SAMEA3545430_00119 | SAMEA3545430_02666 | DNA-directed RNA polymerase subunit omega. | Uncharacterised protein. | 0.999 |
SCI84754.1 | rpoA | SAMEA3545430_00119 | SAMEA3545430_02377 | DNA-directed RNA polymerase subunit omega. | DNA-directed RNA polymerase subunit alpha. | 0.999 |
SCI84754.1 | rpoB | SAMEA3545430_00119 | SAMEA3545430_02332 | DNA-directed RNA polymerase subunit omega. | DNA-directed RNA polymerase subunit beta. | 0.999 |
SCI84754.1 | rpoC | SAMEA3545430_00119 | SAMEA3545430_02333 | DNA-directed RNA polymerase subunit omega. | DNA-directed RNA polymerase subunit beta'. | 0.999 |
SCJ08325.1 | SCI84754.1 | SAMEA3545430_00678 | SAMEA3545430_00119 | Type I restriction enzyme EcoKI subunit R. | DNA-directed RNA polymerase subunit omega. | 0.988 |
SCJ08325.1 | SCJ54631.1 | SAMEA3545430_00678 | SAMEA3545430_01766 | Type I restriction enzyme EcoKI subunit R. | Hef nuclease. | 0.833 |
SCJ08325.1 | SCJ78747.1 | SAMEA3545430_00678 | SAMEA3545430_02666 | Type I restriction enzyme EcoKI subunit R. | Uncharacterised protein. | 0.951 |
SCJ08325.1 | dnaN | SAMEA3545430_00678 | SAMEA3545430_03255 | Type I restriction enzyme EcoKI subunit R. | DNA polymerase III subunit beta. | 0.551 |
SCJ08325.1 | polA | SAMEA3545430_00678 | SAMEA3545430_01502 | Type I restriction enzyme EcoKI subunit R. | DNA polymerase I. | 0.973 |
SCJ08325.1 | recA | SAMEA3545430_00678 | SAMEA3545430_00835 | Type I restriction enzyme EcoKI subunit R. | Recombinase A. | 0.481 |
SCJ08325.1 | rpoA | SAMEA3545430_00678 | SAMEA3545430_02377 | Type I restriction enzyme EcoKI subunit R. | DNA-directed RNA polymerase subunit alpha. | 0.989 |
SCJ08325.1 | rpoB | SAMEA3545430_00678 | SAMEA3545430_02332 | Type I restriction enzyme EcoKI subunit R. | DNA-directed RNA polymerase subunit beta. | 0.987 |
SCJ08325.1 | rpoC | SAMEA3545430_00678 | SAMEA3545430_02333 | Type I restriction enzyme EcoKI subunit R. | DNA-directed RNA polymerase subunit beta'. | 0.954 |
SCJ54631.1 | SCI84754.1 | SAMEA3545430_01766 | SAMEA3545430_00119 | Hef nuclease. | DNA-directed RNA polymerase subunit omega. | 0.986 |
SCJ54631.1 | SCJ08325.1 | SAMEA3545430_01766 | SAMEA3545430_00678 | Hef nuclease. | Type I restriction enzyme EcoKI subunit R. | 0.833 |
SCJ54631.1 | SCJ78747.1 | SAMEA3545430_01766 | SAMEA3545430_02666 | Hef nuclease. | Uncharacterised protein. | 0.932 |
SCJ54631.1 | dnaN | SAMEA3545430_01766 | SAMEA3545430_03255 | Hef nuclease. | DNA polymerase III subunit beta. | 0.888 |
SCJ54631.1 | polA | SAMEA3545430_01766 | SAMEA3545430_01502 | Hef nuclease. | DNA polymerase I. | 0.989 |
page 1 of 4