Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCJ49570.1 | cph2_1 | SAMEA3545430_01610 | SAMEA3545430_00568 | Uncharacterised protein. | Bacteriophytochrome cph2. | 0.999 |
SCJ49570.1 | cph2_2 | SAMEA3545430_01610 | SAMEA3545430_02041 | Uncharacterised protein. | Bacteriophytochrome cph2. | 0.999 |
SCJ49570.1 | gmr_2 | SAMEA3545430_01610 | SAMEA3545430_03170 | Uncharacterised protein. | Cyclic di-GMP phosphodiesterase Gmr. | 0.996 |
SCJ49570.1 | phoR_5 | SAMEA3545430_01610 | SAMEA3545430_01978 | Uncharacterised protein. | Alkaline phosphatase synthesis sensor protein phoR. | 0.833 |
SCJ49570.1 | regX3_3 | SAMEA3545430_01610 | SAMEA3545430_01299 | Uncharacterised protein. | Sensory transduction protein regX3. | 0.864 |
SCJ49570.1 | regX3_4 | SAMEA3545430_01610 | SAMEA3545430_03031 | Uncharacterised protein. | Sensory transduction protein regX3. | 0.864 |
SCJ49570.1 | srrA_3 | SAMEA3545430_01610 | SAMEA3545430_01974 | Uncharacterised protein. | Staphylococcal respiratory response protein A. | 0.864 |
SCJ49570.1 | srrA_4 | SAMEA3545430_01610 | SAMEA3545430_02061 | Uncharacterised protein. | Staphylococcal respiratory response protein A. | 0.864 |
SCJ49570.1 | srrA_5 | SAMEA3545430_01610 | SAMEA3545430_02123 | Uncharacterised protein. | Staphylococcal respiratory response protein A. | 0.864 |
SCJ49570.1 | walR | SAMEA3545430_01610 | SAMEA3545430_03051 | Uncharacterised protein. | Transcriptional regulatory protein walR. | 0.864 |
cph2_1 | SCJ49570.1 | SAMEA3545430_00568 | SAMEA3545430_01610 | Bacteriophytochrome cph2. | Uncharacterised protein. | 0.999 |
cph2_1 | cph2_2 | SAMEA3545430_00568 | SAMEA3545430_02041 | Bacteriophytochrome cph2. | Bacteriophytochrome cph2. | 0.999 |
cph2_1 | gmr_2 | SAMEA3545430_00568 | SAMEA3545430_03170 | Bacteriophytochrome cph2. | Cyclic di-GMP phosphodiesterase Gmr. | 0.999 |
cph2_1 | phoR_5 | SAMEA3545430_00568 | SAMEA3545430_01978 | Bacteriophytochrome cph2. | Alkaline phosphatase synthesis sensor protein phoR. | 0.981 |
cph2_1 | regX3_3 | SAMEA3545430_00568 | SAMEA3545430_01299 | Bacteriophytochrome cph2. | Sensory transduction protein regX3. | 0.716 |
cph2_1 | regX3_4 | SAMEA3545430_00568 | SAMEA3545430_03031 | Bacteriophytochrome cph2. | Sensory transduction protein regX3. | 0.710 |
cph2_1 | srrA_3 | SAMEA3545430_00568 | SAMEA3545430_01974 | Bacteriophytochrome cph2. | Staphylococcal respiratory response protein A. | 0.693 |
cph2_1 | srrA_4 | SAMEA3545430_00568 | SAMEA3545430_02061 | Bacteriophytochrome cph2. | Staphylococcal respiratory response protein A. | 0.686 |
cph2_1 | srrA_5 | SAMEA3545430_00568 | SAMEA3545430_02123 | Bacteriophytochrome cph2. | Staphylococcal respiratory response protein A. | 0.693 |
cph2_1 | walR | SAMEA3545430_00568 | SAMEA3545430_03051 | Bacteriophytochrome cph2. | Transcriptional regulatory protein walR. | 0.684 |
page 1 of 5