STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCJ66609.1Uncharacterised protein. (1232 aa)    
Predicted Functional Partners:
SCJ66588.1
Uncharacterised protein.
       0.776
SCJ79602.1
CRISPR-associated protein.
  
     0.759
SCJ79681.1
Uncharacterized conserved protein (DUF2276).
  
     0.683
SCJ66628.1
Uncharacterised protein.
       0.661
SCJ66647.1
Uncharacterised protein.
       0.661
ltrA
Group II intron-encoded protein ltrA.
  
     0.598
SCJ29082.1
Domain of uncharacterised function (DUF477).
  
  
 0.532
SCJ66669.1
Nitroreductase A.
       0.505
SCJ66570.1
Aspartate aminotransferase.
       0.478
SCJ79546.1
CRISPR type III-B/RAMP module RAMP protein Cmr4.
  
     0.412
Your Current Organism:
uncultured Lachnospira sp.
NCBI taxonomy Id: 446043
Other names: u. Lachnospira sp.
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.