Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCJ69418.1 | SCJ69439.1 | SAMEA3545430_02254 | SAMEA3545430_02255 | VanZ like family. | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. | 0.783 |
SCJ69418.1 | SCJ69464.1 | SAMEA3545430_02254 | SAMEA3545430_02256 | VanZ like family. | Acyltransferase family. | 0.421 |
SCJ69439.1 | SCJ69418.1 | SAMEA3545430_02255 | SAMEA3545430_02254 | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. | VanZ like family. | 0.783 |
SCJ69439.1 | SCJ69464.1 | SAMEA3545430_02255 | SAMEA3545430_02256 | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. | Acyltransferase family. | 0.430 |
SCJ69439.1 | kfoC_3 | SAMEA3545430_02255 | SAMEA3545430_00945 | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. | Chondroitin polymerase. | 0.635 |
SCJ69439.1 | wcaJ_1 | SAMEA3545430_02255 | SAMEA3545430_00948 | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. | Putative colanic biosynthesis UDP-glucose lipid carrier transferase. | 0.858 |
SCJ69464.1 | SCJ69418.1 | SAMEA3545430_02256 | SAMEA3545430_02254 | Acyltransferase family. | VanZ like family. | 0.421 |
SCJ69464.1 | SCJ69439.1 | SAMEA3545430_02256 | SAMEA3545430_02255 | Acyltransferase family. | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. | 0.430 |
SCJ69464.1 | dapB | SAMEA3545430_02256 | SAMEA3545430_00622 | Acyltransferase family. | Dihydrodipicolinate reductase. | 0.440 |
SCJ69464.1 | hyaD_2 | SAMEA3545430_02256 | SAMEA3545430_02257 | Acyltransferase family. | Hyaluronan synthase. | 0.456 |
SCJ69464.1 | kfoC_3 | SAMEA3545430_02256 | SAMEA3545430_00945 | Acyltransferase family. | Chondroitin polymerase. | 0.476 |
SCJ69464.1 | wcaJ_1 | SAMEA3545430_02256 | SAMEA3545430_00948 | Acyltransferase family. | Putative colanic biosynthesis UDP-glucose lipid carrier transferase. | 0.404 |
dapB | SCJ69464.1 | SAMEA3545430_00622 | SAMEA3545430_02256 | Dihydrodipicolinate reductase. | Acyltransferase family. | 0.440 |
hyaD_2 | SCJ69464.1 | SAMEA3545430_02257 | SAMEA3545430_02256 | Hyaluronan synthase. | Acyltransferase family. | 0.456 |
hyaD_2 | kfoC_3 | SAMEA3545430_02257 | SAMEA3545430_00945 | Hyaluronan synthase. | Chondroitin polymerase. | 0.400 |
hyaD_2 | wcaJ_1 | SAMEA3545430_02257 | SAMEA3545430_00948 | Hyaluronan synthase. | Putative colanic biosynthesis UDP-glucose lipid carrier transferase. | 0.493 |
kfoC_3 | SCJ69439.1 | SAMEA3545430_00945 | SAMEA3545430_02255 | Chondroitin polymerase. | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. | 0.635 |
kfoC_3 | SCJ69464.1 | SAMEA3545430_00945 | SAMEA3545430_02256 | Chondroitin polymerase. | Acyltransferase family. | 0.476 |
kfoC_3 | hyaD_2 | SAMEA3545430_00945 | SAMEA3545430_02257 | Chondroitin polymerase. | Hyaluronan synthase. | 0.400 |
kfoC_3 | wcaJ_1 | SAMEA3545430_00945 | SAMEA3545430_00948 | Chondroitin polymerase. | Putative colanic biosynthesis UDP-glucose lipid carrier transferase. | 0.998 |
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