STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amir_0319Hypothetical protein; KEGG: mgm:Mmc1_2162 TPR repeat-containing protein. (556 aa)    
Predicted Functional Partners:
Amir_0318
Hypothetical protein; KEGG: afw:Anae109_2860 cytochrome c oxidase subunit III.
 
     0.841
Amir_1128
Hypothetical protein; KEGG: apomucin.
  
     0.767
Amir_6909
Hypothetical protein.
  
     0.764
Amir_1512
Hypothetical protein.
  
     0.761
Amir_6747
KEGG: hypothetical protein.
  
   
 0.761
Amir_0823
KEGG: dno:DNO_0690 hypothetical protein.
  
     0.758
Amir_5508
PFAM: RES domain protein; KEGG: rsh:Rsph17029_3025 hypothetical protein.
  
     0.752
Amir_6445
Hypothetical protein.
  
     0.752
Amir_6022
KEGG: mucin-associated surface protein (MASP).
  
     0.750
Amir_3526
KEGG: scl:sce2139 hypothetical protein.
  
     0.744
Your Current Organism:
Actinosynnema mirum
NCBI taxonomy Id: 446462
Other names: A. mirum DSM 43827, Actinosynnema mirum DSM 43827, Actinosynnema mirum str. DSM 43827, Actinosynnema mirum strain DSM 43827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.