STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amir_0447PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mxa:MXAN_7294 putative sugar ABC transporter, permease protein. (303 aa)    
Predicted Functional Partners:
Amir_0446
PFAM: extracellular solute-binding protein family 1; KEGG: rle:pRL100263 putative substrate-binding component of ABC transporter.
 
 0.995
Amir_0448
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rlt:Rleg2_3667 binding-protein-dependent transport systems inner membrane component.
 0.993
Amir_0401
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: jan:Jann_3555 binding-protein-dependent transport systems inner membrane component.
 0.970
Amir_0351
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rlt:Rleg2_5484 ABC transporter related; Belongs to the ABC transporter superfamily.
 
 0.969
Amir_0810
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: noc:Noc_0279 ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
 
 0.968
Amir_0403
PFAM: extracellular solute-binding protein family 1; KEGG: mlo:mll4149 sugar ABC transporter, (sugar- binding protein).
 0.945
Amir_0402
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0419 ABC sugar transporter, inner membrane subunit.
  
  
 
0.912
Amir_1845
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_2422 binding-protein-dependent transport systems inner membrane component.
   0.862
Amir_0350
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: acp:A2cp1_4287 binding-protein-dependent transport systems inner membrane component.
 
 0.859
Amir_2834
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL4375 putative transmembrane component of ABC transporter.
 
 0.850
Your Current Organism:
Actinosynnema mirum
NCBI taxonomy Id: 446462
Other names: A. mirum DSM 43827, Actinosynnema mirum DSM 43827, Actinosynnema mirum str. DSM 43827, Actinosynnema mirum strain DSM 43827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.