Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Amir_0553 | Amir_0869 | PFAM: AIG2 family protein; KEGG: pae:PA4164 hypothetical protein. | KEGG: scl:sce2125 hypothetical protein. | 0.612 |
Amir_0553 | Amir_0870 | PFAM: AIG2 family protein; KEGG: pae:PA4164 hypothetical protein. | KEGG: afw:Anae109_1073 hypothetical protein. | 0.677 |
Amir_0553 | Amir_0871 | PFAM: AIG2 family protein; KEGG: pae:PA4164 hypothetical protein. | KEGG: scl:sce2127 hypothetical protein. | 0.622 |
Amir_0553 | Amir_0910 | PFAM: AIG2 family protein; KEGG: pae:PA4164 hypothetical protein. | TIGRFAM: methyltransferase FkbM family; KEGG: pzu:PHZ_c0476 hypothetical protein. | 0.455 |
Amir_0553 | Amir_1403 | PFAM: AIG2 family protein; KEGG: pae:PA4164 hypothetical protein. | Hypothetical protein. | 0.700 |
Amir_0553 | Amir_5519 | PFAM: AIG2 family protein; KEGG: pae:PA4164 hypothetical protein. | Conserved hypothetical protein. | 0.755 |
Amir_0553 | Amir_5524 | PFAM: AIG2 family protein; KEGG: pae:PA4164 hypothetical protein. | PFAM: GCN5-related N-acetyltransferase; KEGG: sil:SPO0965 acetyltransferase. | 0.722 |
Amir_0553 | Amir_6447 | PFAM: AIG2 family protein; KEGG: pae:PA4164 hypothetical protein. | Hypothetical protein; KEGG: CG33251. | 0.759 |
Amir_0869 | Amir_0553 | KEGG: scl:sce2125 hypothetical protein. | PFAM: AIG2 family protein; KEGG: pae:PA4164 hypothetical protein. | 0.612 |
Amir_0869 | Amir_0870 | KEGG: scl:sce2125 hypothetical protein. | KEGG: afw:Anae109_1073 hypothetical protein. | 0.967 |
Amir_0869 | Amir_0871 | KEGG: scl:sce2125 hypothetical protein. | KEGG: scl:sce2127 hypothetical protein. | 0.947 |
Amir_0869 | Amir_0910 | KEGG: scl:sce2125 hypothetical protein. | TIGRFAM: methyltransferase FkbM family; KEGG: pzu:PHZ_c0476 hypothetical protein. | 0.713 |
Amir_0869 | Amir_1403 | KEGG: scl:sce2125 hypothetical protein. | Hypothetical protein. | 0.693 |
Amir_0869 | Amir_5519 | KEGG: scl:sce2125 hypothetical protein. | Conserved hypothetical protein. | 0.763 |
Amir_0869 | Amir_5524 | KEGG: scl:sce2125 hypothetical protein. | PFAM: GCN5-related N-acetyltransferase; KEGG: sil:SPO0965 acetyltransferase. | 0.737 |
Amir_0869 | Amir_6447 | KEGG: scl:sce2125 hypothetical protein. | Hypothetical protein; KEGG: CG33251. | 0.661 |
Amir_0869 | Amir_6479 | KEGG: scl:sce2125 hypothetical protein. | PFAM: membrane-bound metal-dependent hydrolase; KEGG: mag:amb4172 membrane-bound metal-dependent hydrolase. | 0.696 |
Amir_0869 | Amir_6867 | KEGG: scl:sce2125 hypothetical protein. | KEGG: hypothetical protein. | 0.663 |
Amir_0870 | Amir_0553 | KEGG: afw:Anae109_1073 hypothetical protein. | PFAM: AIG2 family protein; KEGG: pae:PA4164 hypothetical protein. | 0.677 |
Amir_0870 | Amir_0869 | KEGG: afw:Anae109_1073 hypothetical protein. | KEGG: scl:sce2125 hypothetical protein. | 0.967 |
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