STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amir_1045PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: sse:Ssed_3347 acyl-CoA dehydrogenase-like protein. (587 aa)    
Predicted Functional Partners:
Amir_1544
KEGG: sfu:Sfum_1403 acetyl-CoA acetyltransferases; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.929
Amir_6230
Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: bmj:BMULJ_05049 propionyl-CoA carboxylase beta chain.
  
 
 0.915
Amir_4372
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: mxa:MXAN_6987 fatty oxidation complex, alpha subunit.
  
 0.897
Amir_5669
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: pmy:Pmen_2590 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase.
  
 0.897
Amir_6663
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bch:Bcen2424_0176 enoyl-CoA hydratase.
   
 0.838
Amir_3165
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: acr:Acry_0624 enoyl-CoA hydratase/isomerase.
   
 0.836
Amir_6226
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mxa:MXAN_2034 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.836
Amir_1047
Non-specific serine/threonine protein kinase; KEGG: scl:sce3369 SWF/SNF family helicase; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein.
   
  0.784
Amir_1046
PFAM: zinc finger SWIM domain protein; KEGG: mxa:MXAN_7273 SWIM zinc finger domain protein.
       0.773
Amir_0699
acetyl-CoA acetyltransferase; KEGG: aba:Acid345_2470 3-ketoacyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.752
Your Current Organism:
Actinosynnema mirum
NCBI taxonomy Id: 446462
Other names: A. mirum DSM 43827, Actinosynnema mirum DSM 43827, Actinosynnema mirum str. DSM 43827, Actinosynnema mirum strain DSM 43827
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