STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amir_1895PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: sme:SMc01159 putative oxidoreductase protein. (342 aa)    
Predicted Functional Partners:
Amir_2998
PFAM: Methyltransferase type 11; Tellurite resistance methyltransferase, TehB, core; thiopurine S- methyltransferase; Methyltransferase type 12; KEGG: methyltransferase type 12.
 
  
 0.914
Amir_4970
PFAM: Methyltransferase type 12; Methyltransferase type 11; Tellurite resistance methyltransferase, TehB, core; thiopurine S-methyltransferase; KEGG: scl:sce2146 putative methyltransferase.
 
  
 0.914
Amir_2993
PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: acp:A2cp1_1436 methyltransferase type 11.
     0.833
Amir_2999
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; KEGG: reh:H16_B1998 transcriptional regulator, XRE- family.
 
   
 0.664
Amir_1776
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: ank:AnaeK_2254 thioredoxin.
  
 
 0.629
Amir_3407
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; KEGG: scl:sce6511 putative transcriptional regulator.
 
     0.610
Amir_2370
KEGG: dal:Dalk_3918 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; PAS fold- 4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAS domain containing protein.
  
  
 0.556
Amir_0833
PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: hch:HCH_02851 molybdopterin/thiamine biosynthesis family protein.
  
  
 0.537
Amir_6550
PFAM: Thioredoxin domain; KEGG: bcy:Bcer98_3221 thioredoxin; Belongs to the thioredoxin family.
  
 
 0.527
Amir_7087
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: gdi:GDI0716 putative thioredoxin; Belongs to the thioredoxin family.
  
 
 0.527
Your Current Organism:
Actinosynnema mirum
NCBI taxonomy Id: 446462
Other names: A. mirum DSM 43827, Actinosynnema mirum DSM 43827, Actinosynnema mirum str. DSM 43827, Actinosynnema mirum strain DSM 43827
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