Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Amir_1943 | Amir_1944 | PFAM: protein of unknown function DUF397. | Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: cko:CKO_01491 hypothetical protein. | 0.873 |
Amir_1943 | Amir_1945 | PFAM: protein of unknown function DUF397. | KEGG: chromosome segregation protein SMC; K03529 chromosome segregation protein. | 0.512 |
Amir_1943 | Amir_1946 | PFAM: protein of unknown function DUF397. | Spermidine synthase-like protein; KEGG: bpt:Bpet3209 spermidine synthase (putrescine aminopropyltransferase). | 0.415 |
Amir_1944 | Amir_1943 | Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: cko:CKO_01491 hypothetical protein. | PFAM: protein of unknown function DUF397. | 0.873 |
Amir_1944 | Amir_1945 | Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: cko:CKO_01491 hypothetical protein. | KEGG: chromosome segregation protein SMC; K03529 chromosome segregation protein. | 0.512 |
Amir_1944 | Amir_1946 | Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: cko:CKO_01491 hypothetical protein. | Spermidine synthase-like protein; KEGG: bpt:Bpet3209 spermidine synthase (putrescine aminopropyltransferase). | 0.415 |
Amir_1945 | Amir_1943 | KEGG: chromosome segregation protein SMC; K03529 chromosome segregation protein. | PFAM: protein of unknown function DUF397. | 0.512 |
Amir_1945 | Amir_1944 | KEGG: chromosome segregation protein SMC; K03529 chromosome segregation protein. | Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: cko:CKO_01491 hypothetical protein. | 0.512 |
Amir_1945 | Amir_1946 | KEGG: chromosome segregation protein SMC; K03529 chromosome segregation protein. | Spermidine synthase-like protein; KEGG: bpt:Bpet3209 spermidine synthase (putrescine aminopropyltransferase). | 0.610 |
Amir_1946 | Amir_1943 | Spermidine synthase-like protein; KEGG: bpt:Bpet3209 spermidine synthase (putrescine aminopropyltransferase). | PFAM: protein of unknown function DUF397. | 0.415 |
Amir_1946 | Amir_1944 | Spermidine synthase-like protein; KEGG: bpt:Bpet3209 spermidine synthase (putrescine aminopropyltransferase). | Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: cko:CKO_01491 hypothetical protein. | 0.415 |
Amir_1946 | Amir_1945 | Spermidine synthase-like protein; KEGG: bpt:Bpet3209 spermidine synthase (putrescine aminopropyltransferase). | KEGG: chromosome segregation protein SMC; K03529 chromosome segregation protein. | 0.610 |