STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amir_4101PFAM: protein of unknown function DUF1702. (328 aa)    
Predicted Functional Partners:
Amir_4102
PFAM: cytochrome P450; KEGG: mxa:MXAN_2304 cytochrome P450 family protein.
    
  0.976
Amir_4111
Hypothetical protein; KEGG: mxa:MXAN_7127 FG-GAP repeat protein.
    
  0.914
Amir_4112
PFAM: ASPIC/UnbV domain protein; FG-GAP repeat protein; KEGG: mxa:MXAN_7127 FG-GAP repeat protein.
    
  0.914
Amir_4117
PFAM: ASPIC/UnbV domain protein; FG-GAP repeat protein; KEGG: mxa:MXAN_7127 FG-GAP repeat protein.
    
  0.914
Amir_4118
Hypothetical protein; KEGG: mxa:MXAN_7127 FG-GAP repeat protein.
    
  0.914
Amir_4103
Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.686
Amir_4100
PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: scl:sce3486 choline dehydrogenase.
       0.482
Your Current Organism:
Actinosynnema mirum
NCBI taxonomy Id: 446462
Other names: A. mirum DSM 43827, Actinosynnema mirum DSM 43827, Actinosynnema mirum str. DSM 43827, Actinosynnema mirum strain DSM 43827
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