STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amir_4722PFAM: proline racemase; KEGG: bat:BAS2643 proline racemase, putative; Belongs to the proline racemase family. (333 aa)    
Predicted Functional Partners:
Amir_4726
PFAM: FAD dependent oxidoreductase; KEGG: bce:BC2836 sarcosine oxidase beta subunit.
 
   
 0.965
Amir_4724
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: bph:Bphy_4670 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
     0.960
Amir_4725
KEGG: vei:Veis_0721 FAD dependent oxidoreductase.
 
     0.957
Amir_4723
PFAM: dihydrodipicolinate synthetase; KEGG: swd:Swoo_2822 dihydrodipicolinate synthetase; Belongs to the DapA family.
 
   
 0.952
Amir_4721
PFAM: Aldehyde Dehydrogenase; KEGG: ccs:CCNA_02881 oxoglutarate semialdehyde dehydrogenase.
 
 
 
 0.941
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
    
 0.920
Amir_1081
PFAM: Proline dehydrogenase; KEGG: mxa:MXAN_7405 proline dehydrogenase.
    
 0.907
Amir_4180
D-aspartate oxidase; PFAM: FAD dependent oxidoreductase; KEGG: similar to D-aspartate oxidase; K00272 D- aspartate oxidase.
    
 0.907
Amir_6745
PFAM: Proline dehydrogenase; KEGG: mxa:MXAN_7405 proline dehydrogenase.
    
 0.907
Amir_0894
KEGG: bte:BTH_II2193 proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; Belongs to the peptidase S33 family.
     
  0.900
Your Current Organism:
Actinosynnema mirum
NCBI taxonomy Id: 446462
Other names: A. mirum DSM 43827, Actinosynnema mirum DSM 43827, Actinosynnema mirum str. DSM 43827, Actinosynnema mirum strain DSM 43827
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