Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Amir_4772 | Amir_4773 | Hypothetical protein; KEGG: pin:Ping_0445 colicin uptake-like protein. | PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: cko:CKO_00925 hypothetical protein. | 0.578 |
Amir_4772 | Amir_4774 | Hypothetical protein; KEGG: pin:Ping_0445 colicin uptake-like protein. | PFAM: protein of unknown function DUF916 cell surface putative; KEGG: bcj:BCAM2172 putative patatin-like phospholipase. | 0.533 |
Amir_4773 | Amir_4772 | PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: cko:CKO_00925 hypothetical protein. | Hypothetical protein; KEGG: pin:Ping_0445 colicin uptake-like protein. | 0.578 |
Amir_4773 | Amir_4774 | PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: cko:CKO_00925 hypothetical protein. | PFAM: protein of unknown function DUF916 cell surface putative; KEGG: bcj:BCAM2172 putative patatin-like phospholipase. | 0.709 |
Amir_4774 | Amir_4772 | PFAM: protein of unknown function DUF916 cell surface putative; KEGG: bcj:BCAM2172 putative patatin-like phospholipase. | Hypothetical protein; KEGG: pin:Ping_0445 colicin uptake-like protein. | 0.533 |
Amir_4774 | Amir_4773 | PFAM: protein of unknown function DUF916 cell surface putative; KEGG: bcj:BCAM2172 putative patatin-like phospholipase. | PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: cko:CKO_00925 hypothetical protein. | 0.709 |