STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amir_5596Hypothetical protein. (222 aa)    
Predicted Functional Partners:
Amir_5595
Hypothetical protein; KEGG: pin:Ping_0445 colicin uptake-like protein.
       0.594
Amir_5593
Hypothetical protein; KEGG: PF6; flagellar central pair-associated protein.
       0.586
Amir_5594
Hypothetical protein.
       0.586
Amir_5597
KEGG: scl:sce8592 hypothetical protein.
       0.578
Amir_5598
PFAM: NUDIX hydrolase; KEGG: scl:sce2352 hypothetical protein.
       0.578
Amir_5592
Hypothetical protein; KEGG: ade:Adeh_4037 MaoC-like dehydratase.
       0.456
Amir_5599
Hypothetical protein.
       0.415
Your Current Organism:
Actinosynnema mirum
NCBI taxonomy Id: 446462
Other names: A. mirum DSM 43827, Actinosynnema mirum DSM 43827, Actinosynnema mirum str. DSM 43827, Actinosynnema mirum strain DSM 43827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.