STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amir_5638Hypothetical protein. (379 aa)    
Predicted Functional Partners:
Amir_5639
Hypothetical protein.
       0.838
Amir_5637
KEGG: mag:amb1782 PRY3 protein.
       0.821
Amir_5636
Hypothetical protein; KEGG: similar to endo-1,4-beta-glucanase.
       0.731
Amir_5635
TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: mgm:Mmc1_2034 phage tail tape measure protein, TP901 family.
       0.603
Amir_5634
Hypothetical protein.
       0.569
Amir_1840
KEGG: pca:Pcar_0512 alkaline phosphatase; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase; Belongs to the alkaline phosphatase family.
  
  
 0.432
Amir_5633
Hypothetical protein.
       0.413
Amir_5632
Hypothetical protein.
       0.402
Your Current Organism:
Actinosynnema mirum
NCBI taxonomy Id: 446462
Other names: A. mirum DSM 43827, Actinosynnema mirum DSM 43827, Actinosynnema mirum str. DSM 43827, Actinosynnema mirum strain DSM 43827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.