STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amir_6149PFAM: BAAT/Acyl-CoA thioester hydrolase; acyl-CoA thioester hydrolase/bile acid-CoA amino acid N- acetyltransferase; KEGG: sus:Acid_3161 palmitoyl-CoA hydrolase. (703 aa)    
Predicted Functional Partners:
Amir_4139
KEGG: fibrocystin-L-like protein.
  
     0.661
Amir_4033
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: RCJMB04_10a6, FOXRED2; FAD-dependent oxidoreductase domain containing 2.
  
    0.647
Amir_4354
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: RCJMB04_10a6, FOXRED2; FAD-dependent oxidoreductase domain containing 2.
  
    0.647
Amir_4467
KEGG: scl:sce9100 hypothetical protein.
  
     0.601
Amir_1839
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: Foxred2; FAD-dependent oxidoreductase domain containing 2.
  
     0.581
Amir_5974
KEGG: hypothetical protein.
  
     0.566
Amir_6458
Hypothetical protein; KEGG: Muc19; mucin 19.
  
     0.519
prmC
Modification methylase, HemK family; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
 
     0.510
Amir_6457
Hypothetical protein; KEGG: eln1; tropoelastin 1.
  
     0.507
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
 
     0.491
Your Current Organism:
Actinosynnema mirum
NCBI taxonomy Id: 446462
Other names: A. mirum DSM 43827, Actinosynnema mirum DSM 43827, Actinosynnema mirum str. DSM 43827, Actinosynnema mirum strain DSM 43827
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