STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amir_6299Hypothetical protein. (169 aa)    
Predicted Functional Partners:
Amir_6300
TIGRFAM: acyltransferase, WS/DGAT/MGAT; PFAM: protein of unknown function UPF0089; KEGG: maq:Maqu_3067 hypothetical protein; Belongs to the long-chain O-acyltransferase family.
     
 0.871
Amir_6301
Mn2+dependent serine/threonine protein kinase; PFAM: aminoglycoside phosphotransferase; KEGG: mch:Mchl_2091 aminoglycoside phosphotransferase.
       0.773
Amir_1406
PFAM: GCN5-related N-acetyltransferase; KEGG: bce:BC2347 acetyltransferase.
  
     0.767
Amir_6445
Hypothetical protein.
  
     0.745
Amir_6514
TIGRFAM: chorismate mutase; KEGG: cha:CHAB381_1299 chorismate mutase/prephenate dehydratase.
  
     0.744
Amir_1393
Hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
     0.725
Amir_6536
Hypothetical protein.
  
     0.721
Amir_1029
Hypothetical protein.
  
     0.700
Amir_0927
Hypothetical protein.
  
     0.686
Amir_6403
PFAM: AIG2 family protein; KEGG: mpo:Mpop_3184 AIG2 family protein.
  
     0.667
Your Current Organism:
Actinosynnema mirum
NCBI taxonomy Id: 446462
Other names: A. mirum DSM 43827, Actinosynnema mirum DSM 43827, Actinosynnema mirum str. DSM 43827, Actinosynnema mirum strain DSM 43827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.