rpmG-2 protein (Actinosynnema mirum) - STRING interaction network

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rpmG-2

TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; KEGG: ribosomal protein L33; K02913 large subunit ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. (54 aa)

Predicted Functional Partners:

rplR

0.999

rpsF

0.998

rpmB-2

0.995

rpmI

0.994

rpmJ

0.994

rpsZ

0.994

rpmE

0.993

rplU

0.990

rpmA

0.990

rpsO

0.990

Your Current Organism:

Actinosynnema mirum

NCBI taxonomy Id: 446462
Other names: A. mirum DSM 43827, Actinosynnema mirum DSM 43827, Actinosynnema mirum str. DSM 43827, Actinosynnema mirum strain DSM 43827

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplR	rplU	Amir_6598	Amir_1187	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.999
rplR	rpmA	Amir_6598	Amir_1188	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; KEGG: smt:Smal_1120 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.999
rplR	rpmB-2	Amir_6598	Amir_5979	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: aba:Acid345_0165 LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	0.999
rplR	rpmE	Amir_6598	Amir_6151	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	Ribosomal protein L31; Binds the 23S rRNA.	0.998
rplR	rpmG-2	Amir_6598	Amir_6648	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; KEGG: ribosomal protein L33; K02913 large subunit ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.999
rplR	rpmI	Amir_6598	Amir_5472	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: aba:Acid345_0714 LSU ribosomal protein L35P; Belongs to the bacterial ribosomal protein bL35 family.	0.999
rplR	rpmJ	Amir_6598	Amir_6587	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; KEGG: aba:Acid345_1250 LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family.	0.999
rplR	rpsF	Amir_6598	Amir_7039	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.998
rplR	rpsO	Amir_6598	Amir_5824	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.997
rplR	rpsZ	Amir_6598	Amir_6601	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.996
rplU	rplR	Amir_1187	Amir_6598	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.999
rplU	rpmA	Amir_1187	Amir_1188	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; KEGG: smt:Smal_1120 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.999
rplU	rpmB-2	Amir_1187	Amir_5979	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: aba:Acid345_0165 LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	0.990
rplU	rpmE	Amir_1187	Amir_6151	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L31; Binds the 23S rRNA.	0.990
rplU	rpmG-2	Amir_1187	Amir_6648	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; KEGG: ribosomal protein L33; K02913 large subunit ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.990
rplU	rpmI	Amir_1187	Amir_5472	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: aba:Acid345_0714 LSU ribosomal protein L35P; Belongs to the bacterial ribosomal protein bL35 family.	0.995
rplU	rpmJ	Amir_1187	Amir_6587	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; KEGG: aba:Acid345_1250 LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family.	0.996
rplU	rpsF	Amir_1187	Amir_7039	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.998
rplU	rpsO	Amir_1187	Amir_5824	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.996
rplU	rpsZ	Amir_1187	Amir_6601	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.989

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