STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amir_6907PFAM: Luciferase-like monooxygenase; KEGG: alkanesulfonate monooxygenase. (380 aa)    
Predicted Functional Partners:
Amir_0882
PFAM: NADPH-dependent FMN reductase; KEGG: cti:RALTA_A1785 NAD(P)H-dependent FMN reductase, sulfate starvation-induced protein.
 
  0.974
Amir_4383
PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: pla:Plav_2004 taurine dioxygenase.
 
 
  0.956
Amir_3893
PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: pen:PSEEN2720 dioxygenase, TauD.
 
 
  0.948
Amir_2285
PFAM: NADPH-dependent FMN reductase; KEGG: rsq:Rsph17025_0771 NADPH-dependent FMN reductase.
 
  0.937
Amir_4312
PFAM: Luciferase-like monooxygenase; KEGG: ssuD; alkanesulfonate monooxygenase protein.
  
  
 
0.922
Amir_6828
PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: cja:CJA_2345 rhodanese-like domain protein.
  
  
  0.919
Amir_0457
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: twin-arginine translocation pathway signal; K02051 sulfonate/nitrate/taurine transport system substrate-binding protein.
  
 
  0.915
Amir_0225
PFAM: NADPH-dependent FMN reductase; KEGG: bpl:BURPS1106A_A1934 NADPH-dependent FMN reductase.
  
  0.914
Amir_1239
Sulfite reductase (ferredoxin); PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: aba:Acid345_2373 nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like.
     
 0.905
Amir_1237
Adenylylsulfate reductase, thioredoxin dependent; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
     
  0.900
Your Current Organism:
Actinosynnema mirum
NCBI taxonomy Id: 446462
Other names: A. mirum DSM 43827, Actinosynnema mirum DSM 43827, Actinosynnema mirum str. DSM 43827, Actinosynnema mirum strain DSM 43827
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