STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amir_7083Hypothetical protein; KEGG: azo:azo3774 putative serine/threonine protein kinase. (502 aa)    
Predicted Functional Partners:
Amir_7082
PFAM: virulence factor MVIN family protein; KEGG: glo:Glov_2048 integral membrane protein MviN.
 
    0.974
Amir_7081
KEGG: ccs:CCNA_00415 hypothetical protein.
 
     0.849
Amir_6537
Hypothetical protein; KEGG: similar to mucin 7, salivary.
  
    0.745
Amir_1257
Hypothetical protein.
  
     0.744
Amir_0113
Hypothetical protein; KEGG: YALI0F05786p.
  
     0.743
Amir_1512
Hypothetical protein.
  
     0.743
Amir_0075
KEGG: sfu:Sfum_2194 hypothetical protein.
  
     0.741
Amir_1443
KEGG: hypothetical protein.
  
     0.739
Amir_6693
Hypothetical protein.
  
     0.739
Amir_0823
KEGG: dno:DNO_0690 hypothetical protein.
  
     0.737
Your Current Organism:
Actinosynnema mirum
NCBI taxonomy Id: 446462
Other names: A. mirum DSM 43827, Actinosynnema mirum DSM 43827, Actinosynnema mirum str. DSM 43827, Actinosynnema mirum strain DSM 43827
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.