STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU84042.1Beta-1,4-xylanase; PFAM: Glycosyl hydrolase family 10. (415 aa)    
Predicted Functional Partners:
ACU84041.1
PFAM: Glycosyl hydrolase family 3 N terminal domain; Glycosyl hydrolase family 3 C terminal domain.
 
   
 0.842
ACU84047.1
PFAM: Acetyl xylan esterase (AXE1).
 
     0.609
ACU85195.1
PFAM: Glycosyl hydrolase family 3 N terminal domain; Glycosyl hydrolase family 3 C terminal domain.
 
   
 0.525
ACU83991.1
Ig-like domain-containing protein; PFAM: Bacterial Ig-like domain (group 4); Belongs to the glycosyl hydrolase 43 family.
 
   
 0.445
ACU84064.1
Ig-like domain-containing protein; PFAM: Bacterial Ig-like domain (group 4).
  
   
 0.441
ACU84140.1
Enterochelin esterase-like enzyme; PFAM: Putative esterase.
  
   0.434
ACU85160.1
Cellobiohydrolase A (1,4-beta-cellobiosidase A); PFAM: Glycosyl hydrolases family 6; Belongs to the glycosyl hydrolase family 6.
 
   
 0.423
Your Current Organism:
Brachybacterium faecium
NCBI taxonomy Id: 446465
Other names: B. faecium DSM 4810, Brachybacterium faecium ATCC 43885, Brachybacterium faecium DSM 4810, Brachybacterium faecium str. DSM 4810, Brachybacterium faecium strain DSM 4810
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.