STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU86727.1Transcriptional regulator, LacI family; PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family. (336 aa)    
Predicted Functional Partners:
ACU85599.1
PFAM: Bacterial regulatory proteins, lacI family.
  
     0.773
ACU86661.1
Transcriptional regulator; PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; DeoR-like helix-turn-helix domain.
  
     0.740
ACU84452.1
PFAM: Bacterial regulatory proteins, lacI family.
  
     0.727
ACU86728.1
PFAM: Alpha-L-rhamnosidase N-terminal domain; Bacterial alpha-L-rhamnosidase.
       0.478
Your Current Organism:
Brachybacterium faecium
NCBI taxonomy Id: 446465
Other names: B. faecium DSM 4810, Brachybacterium faecium ATCC 43885, Brachybacterium faecium DSM 4810, Brachybacterium faecium str. DSM 4810, Brachybacterium faecium strain DSM 4810
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.